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MISSFormer

Code for paper "MISSFormer: An Effective Medical Image Segmentation Transformer". Please read our preprint at the following link: paper_address. Our paper has been accepted by TMI. More detailed comparative experiments and analysis can be found in the early access journal paper:tmi_paper_address.

1. Environment

2. Train/Test

python train.py --dataset Synapse --root_path your DATA_DIR --max_epochs 400 --output_dir your OUT_DIR  --img_size 224 --base_lr 0.05 --batch_size 24
python test.py --dataset Synapse --is_savenii --volume_path your DATA_DIR --output_dir your OUT_DIR --max_epoch 400 --base_lr 0.05 --img_size 224 --batch_size 24

References

@article{huang2021missformer,
  title={MISSFormer: An Effective Medical Image Segmentation Transformer},
  author={Huang, Xiaohong and Deng, Zhifang and Li, Dandan and Yuan, Xueguang},
  journal={arXiv preprint arXiv:2109.07162},
  year={2021}
}