Awesome
TIGER is a Python toolbox to conduct graph vulnerability and robustness research. TIGER contains numerous state-of-the-art methods to help users conduct graph vulnerability and robustness analysis on graph structured data. Specifically, TIGER helps users:
- Quantify network vulnerability and robustness,
- Simulate a variety of network attacks, cascading failures and spread of dissemination of entities
- Augment a network's structure to resist attacks and recover from failure
- Regulate the dissemination of entities on a network (e.g., viruses, propaganda).
For additional information, take a look at the Documentation and our paper:
Evaluating Graph Vulnerability and Robustness using TIGER. Scott Freitas, Diyi Yang, Srijan Kumar, Hanghang Tong, and Duen Horng (Polo) Chau. CIKM Resource Track, 2021.
Setup
To quickly get started, install TIGER using pip
$ pip install graph-tiger
Alternatively, you can clone TIGER, create a new Anaconda environment,
and install the library by running python setup.py install
.
To verify that everything works as expected, you can run the tests cases using python -m pytest tests/
.
Tutorials
We provide 5 in-depth tutorials in the Documentation, each covers a core aspect of TIGER's functionality.
Tutorial 1: Measuring Graph Vulnerability and Robustness
Tutorial 2: Attacking a Network
Tutorial 3: Defending A Network
Tutorial 4: Simulating Cascading Failures on Networks
Tutorial 5: Simulating Entity Dissemination on Networks
Citing
If you find TIGER useful in your research, please consider citing the following paper:
@article{freitas2021evaluating,
title={Evaluating Graph Vulnerability and Robustness using TIGER},
author={Freitas, Scott and Yang, Diyi and Kumar, Srijan and Tong, Hanghang and Chau, Duen Horng},
journal={ACM International Conference on Information and Knowledge Management},
year={2021}
}
Quick Examples
EX 1. Calculate graph robustness (e.g., spectral radius, effective resistance)
from graph_tiger.measures import run_measure
from graph_tiger.graphs import graph_loader
graph = graph_loader(graph_type='BA', n=1000, seed=1)
spectral_radius = run_measure(graph, measure='spectral_radius')
print("Spectral radius:", spectral_radius)
effective_resistance = run_measure(graph, measure='effective_resistance')
print("Effective resistance:", effective_resistance)
EX 2. Run a cascading failure simulation on a Barabasi Albert graph
from graph_tiger.cascading import Cascading
from graph_tiger.graphs import graph_loader
graph = graph_loader('BA', n=400, seed=1)
params = {
'runs': 1,
'steps': 100,
'seed': 1,
'l': 0.8,
'r': 0.2,
'c': int(0.1 * len(graph)),
'k_a': 30,
'attack': 'rb_node',
'attack_approx': int(0.1 * len(graph)),
'k_d': 0,
'defense': None,
'robust_measure': 'largest_connected_component',
'plot_transition': True, # False turns off key simulation image "snapshots"
'gif_animation': False, # True creaets a video of the simulation (MP4 file)
'gif_snaps': False, # True saves each frame of the simulation as an image
'edge_style': 'bundled',
'node_style': 'force_atlas',
'fa_iter': 2000,
}
cascading = Cascading(graph, **params)
results = cascading.run_simulation()
cascading.plot_results(results)
Step 0: Network pre-attack | Step 6: Beginning of cascading failure | Step 99: Collapse of network |
---|---|---|
EX 3. Run an SIS virus simulation on a Barabasi Albert graph
from graph_tiger.diffusion import Diffusion
from graph_tiger.graphs import graph_loader
graph = graph_loader('BA', n=400, seed=1)
sis_params = {
'model': 'SIS',
'b': 0.001,
'd': 0.01,
'c': 1,
'runs': 1,
'steps': 5000,
'seed': 1,
'diffusion': 'min',
'method': 'ns_node',
'k': 5,
'plot_transition': True,
'gif_animation': False,
'edge_style': 'bundled',
'node_style': 'force_atlas',
'fa_iter': 2000
}
diffusion = Diffusion(graph, **sis_params)
results = diffusion.run_simulation()
diffusion.plot_results(results)
Step 0: Virus infected network | Step 80: Partially infected network | Step 4999: Virus contained |
---|---|---|
Techniques Implemented
Vulnerability and Robustness Measures:
- Vertex Connectivity <br> Ellens et al. Graph measures and network robustness (arXiv 2013)
- Edge Connectivity <br> Ellens et al. Graph measures and network robustness (arXiv 2013)
- Diameter <br> Ellens et al. Graph measures and network robustness (arXiv 2013)
- Average Distance <br> Ellens et al. Graph measures and network robustness (arXiv 2013)
- Average Inverse Distance (Efficiency) <br> Ellens et al. Graph measures and network robustness (arXiv 2013)
- Average Vertex Betweenness <br> Ellens et al. Graph measures and network robustness (arXiv 2013)
- Approximate Average Vertex Betweenness <br> Brandes et al. Centrality Estimation in Large Networks (International Journal of Bifurcation and Chaos 2007)
- Average Edge Betweenness <br> Ellens et al. Graph measures and network robustness (arXiv 2013)
- Approximate Average Edge Betweenness <br> Brandes et al. Centrality Estimation in Large Networks (International Journal of Bifurcation and Chaos 2007)
- Average Clustering Coefficient
- Largest Connected Component
- Spectral Radius (GPU Accelerated: :heavy_check_mark:) <br> Tong et al. On the Vulnerability of Large Graphs (ICDM 2010)
- Spectral Gap (GPU Accelerated: :heavy_check_mark:) <br> Estrada Network robustness to targeted attacks. The interplay of expansibility and degree distribution (European Physical Journal B 2006)
- Natural Connectivity (GPU Accelerated: :heavy_check_mark:) <br> Jun et al. Natural connectivity of complex networks (Chinese Physics Letters 2010)
- Approximate Natural Connectivity (GPU Accelerated: :heavy_check_mark:)
- Spectral Scaling (GPU Accelerated: :heavy_check_mark:) <br> Estrada Network robustness to targeted attacks. The interplay of expansibility and degree distribution (European Physical Journal B 2006)
- Generalized Robustness Index (GPU Accelerated: :heavy_check_mark:) <br> Malliaros et al. Fast Robustness Estimation in Large Social Graphs: Communities and Anomaly Detection (SDM 2012)
- Algebraic Connectivity <br> Chan et al. Optimizing network robustness by edge rewiring: a general framework (DMKD 2016)
- Number of Spanning Trees <br> Baras et al. Efficient and robust communication topologies for distributed decision making in networked systems (CDC 2009)
- Approximate Number of Spanning Trees
- Effective Resistance <br> Klein Resistance distance (Journal of Mathematical Chemistry 1993)
- Approximate Effective Resistance
Attack Strategies:
- Remove Node: Netshield <br> Tong et al. On the Vulnerability of Large Graphs (ICDM 2010)
- Remove Node: PageRank <br> Page et al. The PageRank Citation Ranking: Bringing Order to the Web
- Remove Node: Eigenvector Centrality <br> Holme et al. Attack vulnerability of complex networks (Physical Review E 2002)
- Remove Node: Initial Degree (ID) <br> Holme et al. Attack vulnerability of complex networks (Physical Review E 2002)
- Remove Node: Recalculated Degree (RD) <br> Holme et al. Attack vulnerability of complex networks (Physical Review E 2002)
- Remove Node: Initial Betweenness (IB) <br> Holme et al. Attack vulnerability of complex networks (Physical Review E 2002)
- Remove Node: Recalculated Betweenness (RB) <br> Holme et al. Attack vulnerability of complex networks (Physical Review E 2002)
- Remove Node: Random <br> Tong et al. Gelling, and melting, large graphs by edge manipulation (CIKM 2012)
- Remove Edge: Netshield Line
- Remove Edge: PageRank Line <br> Tong et al. Gelling, and melting, large graphs by edge manipulation (CIKM 2012)
- Remove Edge: Eigenvector Centrality Line <br> Tong et al. Gelling, and melting, large graphs by edge manipulation (CIKM 2012)
- Remove Edge: Degree Line
<br> Tong et al. Gelling, and melting, large graphs by edge manipulation (CIKM 2012) - Remove Edge: Random <br> Tong et al. Gelling, and melting, large graphs by edge manipulation (CIKM 2012)
- Remove Edge: Initial Betweenness (IB) <br> Holme et al. Attack vulnerability of complex networks (Physical Review E 2002)
- Remove Edge: Recalculated Betweenness (RB) <br> Holme et al. Attack vulnerability of complex networks (Physical Review E 2002)
- Remove Edge: Initial Degree (ID) Removal <br> Holme et al. Attack vulnerability of complex networks (Physical Review E 2002)
- Remove Edge: Recalculated Degree (RD) Removal <br> Holme et al. Attack vulnerability of complex networks (Physical Review E 2002)
Defense Strategies:
- Vaccinate Node: Netshield <br> Tong et al. On the Vulnerability of Large Graphs (ICDM 2010)
- Vaccinate Node: PageRank <br> Page et al. The PageRank Citation Ranking: Bringing Order to the Web
- Vaccinate Node: Eigenvector Centrality <br> Tong et al. On the Vulnerability of Large Graphs (ICDM 2010)
- Vaccinate Node: Initial Degree (ID) <br> Holme et al. Attack vulnerability of complex networks (Physical Review E 2002)
- Vaccinate Node: Recalculated Degree (RD) <br> Holme et al. Attack vulnerability of complex networks (Physical Review E 2002)
- Vaccinate Node: Initial Betweenness (IB) <br> Holme et al. Attack vulnerability of complex networks (Physical Review E 2002)
- Vaccinate Node: Recalculated Betweenness (RB) <br> Holme et al. Attack vulnerability of complex networks (Physical Review E 2002)
- Vaccinate Node: Random
- Add Edge: PageRank <br> Tong et al. Gelling, and melting, large graphs by edge manipulation (CIKM 2012)
- Add Edge: Eigenvector Centrality <br> Tong et al. Gelling, and melting, large graphs by edge manipulation (CIKM 2012)
- Add Edge: Degree Centrality <br>Tong et al. Gelling, and melting, large graphs by edge manipulation (CIKM 2012)
- Add Edge: Random
Beygelzimer et al. Improving network robustness by edge modification (Physica A 2005) - Add Edge: Preferential
Beygelzimer et al. Improving network robustness by edge modification (Physica A 2005) - Rewire Edge: Random
Beygelzimer et al. Improving network robustness by edge modification (Physica A 2005) - Rewire Edge: Random Neighbor
Beygelzimer et al. Improving network robustness by edge modification (Physica A 2005) - Rewire Edge: Preferential
Beygelzimer et al. Improving network robustness by edge modification (Physica A 2005) - Rewire Edge: Preferential Random
Beygelzimer et al. Improving network robustness by edge modification (Physica A 2005)
Simulation Frameworks:
- Cascading Failure Model <br> Crucitti et al. A model for cascading failures in complex networks (Physical Review E 2004)
- Susceptible-Infected-Susceptible (SIS) Model <br> Kermack et al. A contribution to the mathematical theory of epidemics (Royal Society A 1927)
- Susceptible-Infected-Recovered (SIR) Model <br> Kermack et al. A contribution to the mathematical theory of epidemics (Royal Society A 1927)