Awesome
This version is no longer supported. See <a href="https://github.com/nasqar/seuratv3wizard">SeuratV3Wizard</a> for the new version
SeuratWizard: R Shiny interface for Seurat single-cell analysis library
Online/Demo:
You can try it online at http://nasqar.abudhabi.nyu.edu/SeuratWizard
Run using docker (Recommended):
docker run -p 80:80 aymanm/seuratwizard
This will run on port 80
Local Install:
devtools::install_github("nasqar/SeuratWizard")
Run:
library(SeuratWizard)
SeuratWizard()
This will run on http://0.0.0.0:1234/ by default
To run on specific ip/port:
ip = '127.0.0.1'
portNumber = 5555
SeuratWizard(ip,portNumber)
This will run on http://127.0.0.1:5555/
Screenshots:
Acknowledgements:
-
Rahul Satija, Andrew Butler and Paul Hoffman (2017). Seurat: Tools for Single Cell Genomics. R package version 2.2.1. https://CRAN.R-project.org/package=Seurat