Awesome
Visualising spatial data with tmap
In this workshop you will learn how to plot spatial data in R by using the tmap package. This package is an implementation of the grammar of graphics for thematic maps, and resembles the syntax of ggplot2. This package is useful for both exploration and publication of spatial data, and offers both static and interactive plotting.
For those of you who are unfamiliar with spatial data in R, we will briefly introduce the fundamental packages for spatial data, which are sf and stars. With demonstrations and exercises, you will learn how to process spatial objects from various types (polygons, points, lines, rasters, and simple features), and how to plot them.
Besides plotting spatial data, we will also discuss the possibilities of publication. Maps created with tmap can be exported as static images, html files, but they can also be embedded in rmarkdown documents and shiny apps.
Documentation
See https://github.com/mtennekes/tmap for former presentations and blog posts about tmap. The most useful links are:
Presentation slides: Creating thematic maps in R
Tennekes, M., 2018, tmap: Thematic Maps in R, Journal of Statistical Software, 84(6), 1-39
We are currently writing a book on tmap. We aim to make a draft version public by the end of this year.
Installation of tmap
Both tmap and tmaptools can be installed from CRAN. Note that the installation requires some effort for Linux and macOS, since additional system libraries are needed, e.g. gdal. See https://github.com/mtennekes/tmap#installation for installation details.
Loading the required packages:
library(sf)
library(stars)
library(tmap)
library(tmaptools)
Getting spatial data
It's your choice what spatial data you want to use in this workshop. Some suggestions:
Data contained in tmap
There are a couple of datasets contained in tmap. The most interesting are World, which contains World country data, metro, which contains population time series for large metropolitan areas, and land, which is rasterized data of land use and tree coverage.
library(tmap)
data(World, metro, land)
Data from spData and spDataLarge
The packages spData and spDataLarge contain many spatial datasets. See https://github.com/Nowosad/spData for an overview of available datasets.
library(spData)
library(spDataLarge)
# install spDataLarge with install.packages('spDataLarge', repos='https://nowosad.github.io/drat/', type='source'))
Open Street Map data
Large datasets from Open Street Map per country can be found at https://download.geofabrik.de/.
There is a handy R-package, called geofabrik via which these datasets can be loaded into R.
library(geofabrik)
Natural Earth Data
The package rnaturalearth is an interface to www.naturalearthdata.com, a great source of shapes.
library(rnaturalearth)
airports <- ne_download(scale = 10, type = 'airports' )
Crimes in London
This file contains data from crimes committed in Greater London in October 2015. It is used in the tmap JSS paper. See vignette("tmap-JSS-code") for the updated reproduction code.
Assignment
Explore, analyse and present the dataset of your choice with tmap.
- In the exploration phase, try to find interesting patterns in the data. Experiment with different types of layers and aesthetic mappings.
- Next, try different color palettes and class intervals. Also, experiment with small multiples.
- Finally, fine-tune the maps such that they are publication-ready. Export them to either static files of interactive maps.
Extra: embed a map made with tmap in a shiny app. A shiny app can be useful for exploration, analysis, and presentation.