Awesome
Discovery of novel antimicrobial peptides with notable antibacterial potency by a LLM-based foundation model
<div align=center> <img src="./workflow.png" width="80%" height="80%" alt="TOC" align=center /> </div>Python Dependencies
Python >= 3.8
Pytorch >= 1.13.1
RDKit >= 2022.09.1
transformers >= 4.24.0
pandas >= 1.5.3
scipy == 1.10.0
Pretrained Model
The weight and configuration files of pre-trained model can be found in Zenedo.
Generation
AMP_GPT_generator.py can be used for generation.