Awesome
paintera_tools
Tools for genetrating, curating and merging paintera datasets.
Functionality
This package provides functionality to interacte with paintera datasets. The three main applications are:
- convert n5 or h5 container to paintera dataset via
convert_to_paintera_format
- split objects via
interactive_splitter
orbatch_splitter
- export merge segmentation via
serialize_from_commit
Installation
You can install this package via conda (only python 3.7 and linux for now):
conda install -c conda-forge -c cpape paintera_tools
To set up a developement environment, you need cluster_tools and its dependencies.
Usage
For usage examples see examples/
. You can obtain the example cremi data from here.