Awesome
Variable importance via oscillations <img src="man/figures/logo.png" align="right" width="150"/>
<img src="http://cranlogs.r-pkg.org/badges/grand-total/vivo" />
Overview
The vivo
package helps to calculate
- instance level variable importance (local sensitivity).
The measure is based on Ceteris Paribus profiles and can be calculated in eight variants. Select the variant
that suits your needs by setting parameters: absolute_deviation
,
point
and density
.
- model level variable importance (global sensitivity).
The measure is based on Partial Dependence Profiles.
vivo package
The main functions are global_variable_importance()
and local_variable_importance()
.
vivo
is a part of DrWhy
collection of tools for Visual Exploration, Explanation and Debugging of
Predictive Models.
Installation
From CRAN
install.packages("vivo")
From GitHub
install.packages("devtools")
devtools::install_github("ModelOriented/vivo")
Intuition
Local variable importance
Ceteris Paribus is a latin phrase meaning „other things held constant” or „all else unchanged”. Ceteris Paribus Plots show how the model response depends on changes in a single input variable, keeping all other variables unchanged. They work for any Machine Learning model and allow for model comparisons to better understand how a black model works.
The measure is based on Ceteris Paribus profiles oscillations. In particular, the larger influence of an explanatory variable on prediction at a particular instance, the larger the deviation along the corresponding Ceteris Paribus profile. For a variable that exercises little or no influence on model prediction, the profile will be flat or will barely change.
Global variable importance
Here we have a similar intuition as above, but we are looking at Partial Dependence Profiles, because they show how the prediction changes for the model, not only for observation.
<img src="man/figures/vivo_gif.gif" align="center" width="600"/>How to use
References
- Ceteris Paribus profiles
ceteris_paribus()
fromingredients
- Introduction to Ceteris Paribus
- Partial Dependence Profiles
partial_dependence()
fromingredients
- Introduction to Partial Dependence Profiles
The package was created as a part of master’s diploma thesis at Warsaw University of Technology at Faculty of Mathematics and Information Science by Anna Kozak.