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FusionNet_Pytorch

FusionNet: A deep fully residual convolutional neural network for image segmentation in connectomics

Requirements

Download code

git clone https://github.com/GunhoChoi/FusionNet_Pytorch
cd FusionNet_Pytorch

Download Map data

wget https://people.eecs.berkeley.edu/~tinghuiz/projects/pix2pix/datasets/maps.tar.gz
tar -xzvf maps.tar.gz

Make model directory

mkdir model

Train Model

python3 main.py  -> medical image without augmentation
python3 main_augmented.py  -> map image with naive augmentation

Out of memory error -> change batch_size / img_size / out_dim

Result

Medical Image

<img src="./result/original_image_185_0.png" width="20%"><img src="./result/label_image_185_0.png" width="20%"><img src="./result/gen_image_185_0.png" width="20%">

Map Image

<img src="./result/satel_image_31_41.png" width="100%"> <img src="./result/map_image_31_41.png" width="100%"> <img src="./result/gen_image_31_41.png" width="100%">

Original Image / Label Image / Generated Image

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