Awesome
<!-- badges: start --> <!-- badges: end -->HumanDiseaseOntology
Repository for the Human Disease Ontology (DO).
Announcements
-
LIVE as of the May 2024 release -- The prefix for OMIM cross-references and susceptibilities is now 'MIM', not 'OMIM', in the Human Disease Ontology. For details refer to https://github.com/DiseaseOntology/HumanDiseaseOntology/issues/1301.
-
LIVE as of the July 2024 release -- Acronyms are now annotated in the DO. For background information refer to https://github.com/information-artifact-ontology/ontology-metadata/issues/135. Note: Acronyms retain their synonym scope (exact, narrow, etc.). This is an additional annotation using
owl:Axiom
,oboInOwl:hasSynonymType
and the new synonym typeOMO:0003012
(acronym), e.g.
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/DOID_0040093"/>
<owl:annotatedProperty rdf:resource="http://www.geneontology.org/formats/oboInOwl#hasExactSynonym"/>
<owl:annotatedTarget xml:lang="en">DIL</owl:annotatedTarget>
<oboInOwl:hasSynonymType rdf:resource="http://purl.obolibrary.org/obo/OMO_0003012"/>
</owl:Axiom>
Details
DO OBO and OWL files are available in our GitHub repository. The DO provides both the asserted DO is_a hierarchy and inferred versions of our ontology files. Please review our file README for details.
DO website: http://www.disease-ontology.org
DO curation and production moved to OWL, git, and GitHub in November 2015. DO's SVN repository on Sourceforge.net has been retired but is still available for historical reference.
A tutorial describing DO's editorial activities is available at: https://github.com/DiseaseOntology/HumanDiseaseOntology/blob/master/src/ontology/README-editors.md
Documentation on Disease Ontology web site. Contact: Lynn Schriml